| Watson-Venter Shared chr-Y SNPs | |||||
| (R1b1b2g - S21+) | |||||
| Compiled by Tim Janzen ------ with | Notes | ||||
| Reference and Variant Alleles added by Ron Scott | |||||
| AZFa region - non-R1b1c (proposed exceptions) ---- with | Notes | ||||
| Position | SNP | Ref Allele | Variant | ||
| 1 | 2721694 | rs2253109 | A | G | |
| 2 | 2980492 | rs2535180 | G | A | |
| 3 | 2980633 | rs2535181.1 | A | G | |
| 4 | 3017650 | rs2534240 | A | G | |
| 5 | 3124831 | rs9650933 | A | G | |
| 6 | 3126506 | rs2652913 | T | C | |
| 7 | 3129109 | rs2652921 | G | A | |
| 8 | 3131386 | rs2652929 | G | A | |
| 9 | 3161174 | rs2534214.1 | T | C | |
| 10 | 3230969 | rs2907867 | T | C | |
| 11 | 3231196 | rs3014802.1 | C | T | |
| 12 | 3302116 | rs1270115 | A | G | |
| 13 | 3362125 | rs2552813 | T | C | |
| 14 | 3513793 | rs2444421 | G | T | |
| 15 | 3516391 | rs2444439 | T | C | |
| 16 | 3516714 | rs34256727.1 | C | A | |
| 17 | 3533956 | rs1026295 | A | G | |
| 18 | 3583547 | rs2450641 | G | A | |
| 19 | 3583642 | rs2450642 | A | G | |
| 20 | 3619501 | rs35206948.1 | C | A | |
| 21 | 3698438 | rs2752276 | C | T | |
| 22 | 3830122 | rs2752197.1 | G | C | |
| 23 | 3873959 | rs33998049 | T | C | |
| 24 | 4686104 | rs34007059 | G | T | |
| 25 | 4830044 | rs3102702 | A | C | |
| 26 | 5040970 | rs2571700 | C | G | |
| 27 | 5046175 | rs2563438 | T | C | |
| 28 | 5049199 | rs2563450 | C | G | |
| 29 | 5054235 | rs35177802 | A | T | |
| 30 | 5061776 | rs2563491.1 | T | G | |
| 31 | 5061906 | rs2563492 | T | C | |
| 32 | 5147053 | rs35664920 | A | G | |
| 33 | 5195960 | rs28720892 | C | T | |
| 34 | 5363879 | rs2574026 | G | A | |
| 35 | 5367435 | rs2755371 | C | T | |
| 36 | 5367493 | rs2574060 | A | C | |
| 37 | 5481562 | novel | C | T | |
| 38 | 5861957 | novel | T | C | |
| 39 | 5862032 | novel | C | G | |
| 40 | 5909423 | rs2500852 | G | A | |
| 41 | 5909525 | rs2500853 | C | A | |
| 42 | 5988866 | rs34922110.1 | G | A | |
| 43 | 6001749 | rs2441313 | A | T | |
| 44 | 6003666 | rs2921692 | G | C | |
| 45 | 6474753 | rs2558898 | G | T | |
| 46 | 6474766 | rs2558899 | A | T | |
| 47 | 6474804 | rs2558900 | C | T | |
| 48 | 6597379 | rs2434027 | G | A | |
| 49 | 6992790 | rs7892861 | A | T | |
| 50 | 7306726 | rs34001725 | C | T | |
| 51 | 7424282 | rs7067275 | G | A | |
| 52 | 8856078 | S21+ | rs16981293 | C | T |
| 53 | 8865525 | rs1264078 | A | G | |
| 54 | 10596978 | novel | A | T | |
| 55 | 10701769 | rs2566496 | A | T | |
| 56 | 11912433 | novel | A | T | |
| 57 | 11912664 | novel | C | T | |
| 58 | 11935703 | novel | G | A | |
| 59 | 11942911 | novel | A | C | |
| 60 | 11942984 | novel | T | C | |
| 61 | 11961963 | novel | A | G | |
| 62 | 11961983 | novel | G | C | |
| 63 | 11962048 | novel | C | T | |
| 64 | 12417422 | novel | A | G | |
| 65 | 12654641 | rs9785657 | G | T | |
| 66 | 12933864 | rs9786460 | A | G | |
| 67 | 12934053 | rs7892854 | C | T | |
| 68 | 12942936 | rs2740980 | A | G | |
| 69 | 12943108 | rs2740981 | G | A | |
| 70 | 12979419 | rs2713254 | A | C | |
| 71 | 13032836 | rs11799149 | G | A | |
| 72 | 13151202 | AZFa | rs13304168 | C | T |
| 73 | 13184196 | region | novel | A | C |
| 74 | 13211040 | rs7892925 | T | C | |
| 75 | 13373585 | rs7893052 | T | C | |
| 76 | 13465511 | rs35108305 | C | A | |
| 77 | 13499115 | rs9786537 | G | C | |
| 78 | 13595577 | rs7067251 | C | G | |
| 79 | 13681909 | rs11799198 | C | G | |
| 80 | 15514463 | rs13304223 | A | T | |
| 81 | 16354175 | rs11799151 | C | G | |
| 82 | 16370123 | rs9786171 | A | G | |
| 83 | 19612663 | rs6530599 | A | G | |
| 84 | 19612862 | rs1136210 | A | G | |
| 85 | 19612997 | rs6530602 | T | C | |
| 86 | 19613055 | rs6530603 | C | A | |
| 87 | 19613128 | rs4030415 | C | T | |
| 88 | 19613392 | rs3950479 | A | C | |
| 89 | 19613711 | rs10465459 | G | A | |
| 90 | 19613854 | rs10465460 | T | A | |
| 91 | 20411776 | rs7067348 | T | C | |
| 92 | 20616699 | rs34276300 | A | C | |
| 93 | 20778997 | rs7892901 | G | A | |
| 94 | 21120848 | rs9306842 | T | A | |
| 95 | 22382982 | rs2178500 | G | T | |
| 96 | 22857377 | rs6530626 | A | C | |
| 97 | 26248434 | rs804774.1 | T | C | |
| 98 | 27198031 | rs35733966 | G | T | |
| 99 | 27198083 | rs34303901 | T | A | |
| 100 | 57392694 | rs7067267 | G | T | |
| 101 | 57393321 | rs11799258 | A | G | |
| 102 | 57393445 | rs2527475 | G | A | |
| 103 | 57393534 | rs2527474 | G | T | |
| 104 | 57393562 | rs2527473 | T | A | |
| 105 | 57393594 | rs10449125 | C | T | |
| 106 | 57393597 | rs10449157 | A | C | |
| 107 | 57393621 | rs2527472 | A | G | |
| 108 | 57393698 | rs2527471 | G | A | |
| 109 | 57395638 | rs9633271 | A | C | |
| 110 | 57395806 | rs10449160 | T | G | |
| 111 | 57398199 | rs2527455 | C | T | |
| 112 | 57398403 | rs2527454 | T | C | |
| 113 | 57398460 | rs2527453 | C | G | |
| 114 | 57402503 | rs2527447 | A | G | |
| 115 | 57402619 | rs2641170 | A | C | |
| 116 | 57402655 | rs2527446.1 | A | G | |
| 117 | 57403213 | rs2334093 | T | G | |
| 118 | 57403647 | rs9633253 | T | G | |
| 119 | 57403691 | rs9633252 | A | G | |
| 120 | 57425535 | rs2641136 | C | G | |
| 121 | 57425576 | rs1817880 | G | A | |
| 122 | 57425782 | rs4104975 | C | G | |
| 123 | 57425918 | rs3855803 | G | C | |
| 124 | 57426009 | rs3878828 | T | C | |
| 125 | 57435386 | rs12171801 | T | C | |
| 126 | 57437589 | rs2334089 | T | A | |
| 127 | 57437671 | rs4047348 | T | C | |
| 128 | 57437745 | rs11152878 | A | C | |
| 129 | 57437834 | rs28546143 | C | G | |
| 130 | 57438124 | rs1849971 | G | A | |
| 131 | 57440935 | rs6568293 | A | C | |
| 132 | 57441017 | rs7893053 | T | G | |