R1b DYS492 Analysis

Comparison of R1b allele frequencies between haplotypes with DYS492=12 & under (71%) vs. DYS492=13 & over (29%). n=1866. note significant difference at DYS390

locus	a	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	mod	var
393	12				.00	.05	.91	.03																															13	.09
393	13					.01	.94	.04	.00																														13	.07
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
390	12															.01	.07	.69	.22	.01																			24	.33
390	13															.02	.56	.36	.05	.00																			23	.41
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
19	12					.00	.01	.89	.09	.01																													14	.13
19	13						.01	.89	.11																														14	.10
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
391	12		.00	.27	.70	.02																																	11	.24
391	13		.00	.30	.65	.05																																	11	.30
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
385a	12			.03	.89	.06	.01	.01	.00																														11	.22
385a	13		.00	.03	.88	.08	.01																																11	.15
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
385b	12			.00	.01	.02	.12	.66	.15	.03	.01																												14	.68
385b	13				.02	.01	.05	.81	.10	.02																													14	.40
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
426	12			.00	.00	.97	.02																																12	.03
426	13				.01	.98	.01																																12	.02
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
388	12				.00	.98	.01	.00																															12	.03
388	13					1.0	.00																																12	.00
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
439	12			.00	.18	.65	.15	.02	.00																														12	.42
439	13			.01	.22	.63	.14	.01																															12	.42
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
389i	12		.00			.05	.80	.14	.01																														13	.24
389i	13				.01	.03	.85	.12																															13	.17
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
392	12				.01	.01	.83	.14	.01																														13	.20
392	13					.01	.98	.01	.00																														13	.03
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
389ii	12																		.00		.00	.08	.62	.26	.04	.00													29	.49
389ii	13																				.01	.12	.65	.18	.04														29	.52
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
458	12							.00	.02	.19	.51	.21	.06	.01	.00																								17	.85
458	13								.02	.22	.44	.25	.05	.01																									17	.88
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
459a	12	.04	.95	.01																																			9	.05
459a	13	.01	.98	.01																																			9	.03
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
459b	12		.18	.80	.02																																		10	.17
459b	13		.15	.84	.01																																		10	.14
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
455	12			.02	.98	.01																																	11	.02
455	13		.00	.02	.97	.01																																	11	.04
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
454	12			.00	.98	.01																																	11	.02
454	13				.98	.02																																	11	.02
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
447	12																.01	.11	.76	.11	.01	.00																	25	.31
447	13																.01	.29	.59	.10	.00																		25	.41
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
437	12							.10	.87	.03																													15	.13
437	13							.13	.84	.04																													15	.16
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
448	12										.01	.19	.74	.06	.00																								19	.28
448	13								.00			.08	.88	.04	.00																								19	.18
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
449	12																			.00	.02	.12	.37	.33	.11	.04	.00												29	1.14
449	13																				.01	.15	.39	.33	.11	.02	.00												29	.94
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
464a	12						.03	.15	.79	.03	.01																												15	.28
464a	13			.00			.01	.16	.80	.02	.00																												15	.30
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
464b	12						.01	.03	.72	.23	.01																												15	.30
464b	13							.03	.71	.25	.02																												15	.28
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
464c	12							.00	.10	.40	.50	.01																											17	.46
464c	13							.00	.09	.36	.50	.04																											17	.53
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
464d	12								.01	.07	.76	.15	.01																										17	.28
464d	13								.01	.09	.49	.37	.03																										17	.53
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
460	12	.00		.18	.75	.07	.00																																11	.26
460	13			.18	.79	.03																																	11	.19
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
H4	12		.00	.16	.73	.10	.00																																11	.29
H4	13		.01	.27	.66	.06	.01																																11	.35
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
YCAIIa	12										.00	.02	.96	.01		.00	.01																						19	.16
YCAIIa	13											.03	.94	.01	.01		.01																						19	.20
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
YCAIIb	12												.03	.00	.02	.07	.83	.06	.00																				23	.62
YCAIIb	13												.02		.04	.13	.76	.04	.00																				23	.63
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
456	12					.00		.02	.38	.40	.19	.01	.00																										16	.70
456	13							.01	.30	.40	.27	.01		.01																									16	.84
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
607	12						.00	.11	.70	.17	.01																												15	.34
607	13					.01	.02	.20	.72	.05																													15	.37
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
576	12								.01	.04	.24	.44	.21	.06	.00	.00																							18	.96
576	13								.01	.17	.41	.32	.07	.02																									17	.92
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
570	12						.00	.01	.02	.15	.55	.20	.06	.01	.00	.00																							17	.92
570	13							.00	.01	.09	.57	.25	.06	.00																									17	.65
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
CDYa	12																									.00	.01	.04	.14	.29	.28	.17	.04	.02	.00				36	1.79
CDYa	13																									.00		.02	.12	.36	.33	.14	.02	.00					36	1.12
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
CDYb	12																										.00	.00	.01	.07	.22	.29	.20	.15	.04	.02	.00	.00	38	2.15
CDYb	13																												.00	.06	.23	.37	.21	.09	.03				38	1.37
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
442	12		.00	.01	.14	.74	.10	.01	.00																														12	.32
442	13				.13	.67	.17	.02	.00																														12	.42
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
438	12			.00	.01	.94	.04																																12	.07
438	13				.04	.94	.01	.01																															12	.08
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
531	12		.00		.91	.09	.00	.00																															11	.11
531	13	.01			.99	.01																																	11	.07
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
578	12	.00	.97	.02	.00																																		9	.04
578	13	.01	.96	.02																																			9	.09
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
395S1a	12						.00	.00	.95	.04																													15	.05
395S1a	13							.01	.90	.09																													15	.09
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
395S1b	12								.01	.97	.02																												16	.03
395S1b	13								.03	.96	.01																												16	.04
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
590	12	.99	.01																																				8	.02
590	13	.99	.00																																				8	.01
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
537	12		.01	.90	.09	.01																																	10	.11
537	13			.91	.08	.01																																	10	.11
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
641	12	.00		.99	.01																																		10	.01
641	13		.01	.98	.01																																		10	.02
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
472	12	1.0	.00																																				8	.00
472	13	1.0																																					8	.00
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
406S1	12	.00	.02	.84	.12	.02																																	10	.20
406S1	13	.00	.02	.88	.08	.01	.01																																10	.20
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
511	12	.00	.04	.83	.13	.00																																	10	.18
511	13		.03	.88	.09	.01																																	10	.14
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
425	12				.00	.99	.01																																12	.01
425	13				.00	.99	.00																																12	.01
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
413a	12								.00	.01			.00	.01	.16	.16	.64	.01	.00																				23	1.30
413a	13							.00						.00	.05	.12	.82		.00																				23	.59
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
413b	12														.01	.02	.92	.04	.02																				23	.16
413b	13															.02	.88	.07	.03	.00																			23	.24
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
557	12							.00	.08	.73	.16	.02	.00						.00																				16	.45
557	13							.01	.10	.72	.15	.02																											16	.38
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
594	12	.00	.00	.97	.03																																		10	.04
594	13	.00		.96	.04																																		10	.05
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
436	12			.00	.00	.99	.00	.00																															12	.02
436	13			.01		.98	.01																																12	.04
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
490	12			.01	.00	.98	.01																																12	.05
490	13			.01		.97	.02	.00																															12	.08
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
534	12					.00	.01	.13	.49	.26	.08	.01	.00																										15	.86
534	13						.01	.15	.54	.22	.07	.01																											15	.70
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
450	12	.97	.01	.00																																			8	.06
450	13	1.0																																					8	.00
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
444	12			.00	.13	.69	.17	.01	.00																														12	.34
444	13				.07	.77	.14	.02	.00																														12	.30
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
481	12										.00	.00		.01	.07	.59	.15	.07	.09	.01	.00		.00																22	1.42
481	13										.00		.01	.02	.07	.67	.18	.04	.01																				22	.73
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
520	12												.04	.85	.10	.01																							20	.18
520	13												.03	.85	.12																								20	.14
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
446	12				.00	.06	.74	.17	.03	.00																													13	.34
446	13				.00	.09	.77	.12	.02																														13	.29
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
617	12			.01	.01	.88	.09	.01																															12	.18
617	13				.01	.97	.02																																12	.03
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
568	12	.00		.02	.96	.02	.00																																11	.07
568	13	.00		.05	.93	.01																																	11	.09
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
487	12					.01	.92	.06	.01	.00																													13	.12
487	13					.02	.90	.06	.01																														13	.13
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
572	12		.00	.09	.86	.05	.00																																11	.15
572	13			.05	.92	.03																																	11	.08
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
640	12			.00	.93	.07	.00																																11	.07
640	13		.01	.00	.96	.03																																	11	.06
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
492	12			.00	.02	.97																																	12	.03
492	13						.93	.07	.00																														13	.08
		8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44
565	12			.00	.11	.87	.02																																12	.14
565	13			.01	.08	.89	.02																																12	.12